Softwares & AI Tools
AI Tools
A collaborative list of awesome AI tools.
If anyone has any questions or concerns while using them, we can provide 1-on-1 technical support.
AlphaFold
AlphaFold is an AI system developed by DeepMind that predicts a protein’s 3D structure from its amino acid sequence.
IsoNet
IsoNet is a deep learning-based software package that iteratively reconstructs the missing-wedge information and increases the signal-to-noise ratio, using the knowledge learned from raw tomograms.
nextPYP
NextPYP is a scalable platform for single-particle cryo-EM/ET image analysis.
Distributional Graphormer(DIG)
Distributional Graphormer is a novel deep learning framework, able to predict the equilibrium distribution of molecular systems.
RFdiffusion
RFdiffusion is a generative model for protein design, an open-source method used to generate structures, with the option to incorporate conditional information.
Chroma
Chroma is an AI-native open-source embedded database that empowers developers to add state and memory capabilities to AI-powered applications by leveraging embedded technology.
Softwares
A collaborative list of awesome softwares.
If anyone has any questions or concerns while using them, we can provide 1-on-1 technical support.
Chimera
UCSF Chimera is a program used for interactive visualization and analysis of molecular structures and related data.
eTomo
eTomo is a software used for processing electron tomography images.
PEET
PEET is a software used for electron tomography three-dimensional reconstruction and analysis.
serialEM
SerialEM is a software used for biological electron microscope imaging data collection and control.
MotionCor
MotionCor is an advanced software for electron microscope image processing.
Relion
RELION is a software used for cryo-electron microscopy (cryo-EM) data processing and three-dimensional reconstruction.
CryoSPARK
CryoSPARC is a software platform used for cryo-electron microscopy imaging data processing and three-dimensional reconstruction.